| A comprehensive, CRISPR-based functional analysis of essential genes in bacteria JM Peters, A Colavin, H Shi, TL Czarny, MH Larson, S Wong, JS Hawkins, ... Cell 165 (6), 1493-1506, 2016 | 699 | 2016 |
| Profiling the human intestinal environment under physiological conditions D Shalon, RN Culver, JA Grembi, J Folz, PV Treit, H Shi, FA Rosenberger, ... Nature 617 (7961), 581-591, 2023 | 188 | 2023 |
| Disruption of lipid homeostasis in the Gram-negative cell envelope activates a novel cell death pathway HA Sutterlin, H Shi, KL May, A Miguel, S Khare, KC Huang, TJ Silhavy Proceedings of the National Academy of Sciences 113 (11), E1565-E1574, 2016 | 176 | 2016 |
| Monoclonal antibody targeting the β-barrel assembly machine of Escherichia coli is bactericidal KM Storek, MR Auerbach, H Shi, NK Garcia, D Sun, NN Nickerson, R Vij, ... Proceedings of the National Academy of Sciences 115 (14), 3692-3697, 2018 | 173 | 2018 |
| How to build a bacterial cell: MreB as the foreman of E. coli construction H Shi, BP Bratton, Z Gitai, KC Huang Cell 172 (6), 1294-1305, 2018 | 170 | 2018 |
| Quantum cloning machines and the applications H Fan, YN Wang, L Jing, JD Yue, HD Shi, YL Zhang, LZ Mu Physics Reports 544 (3), 241-322, 2014 | 143 | 2014 |
| Rapid, precise quantification of bacterial cellular dimensions across a genomic-scale knockout library T Ursell, TK Lee, D Shiomi, H Shi, C Tropini, RD Monds, A Colavin, ... BMC biology 15, 1-15, 2017 | 127 | 2017 |
| Klebsiella michiganensis transmission enhances resistance to Enterobacteriaceae gut invasion by nutrition competition RA Oliveira, KM Ng, MB Correia, V Cabral, H Shi, JL Sonnenburg, ... Nature microbiology 5 (4), 630-641, 2020 | 80 | 2020 |
| Deep phenotypic mapping of bacterial cytoskeletal mutants reveals physiological robustness to cell size H Shi, A Colavin, M Bigos, C Tropini, RD Monds, KC Huang Current Biology 27 (22), 3419-3429. e4, 2017 | 69 | 2017 |
| RodZ modulates geometric localization of the bacterial actin MreB to regulate cell shape A Colavin, H Shi, KC Huang Nature communications 9 (1), 1280, 2018 | 66 | 2018 |
| Single-molecule imaging reveals modulation of cell wall synthesis dynamics in live bacterial cells TK Lee, K Meng, H Shi, KC Huang Nature communications 7 (1), 13170, 2016 | 54 | 2016 |
| Starvation induces shrinkage of the bacterial cytoplasm H Shi, CS Westfall, J Kao, PD Odermatt, SE Anderson, S Cesar, M Sievert, ... Proceedings of the National Academy of Sciences 118 (24), e2104686118, 2021 | 51 | 2021 |
| Programming a Pavlovian-like conditioning circuit in Escherichia coli H Zhang, M Lin, H Shi, W Ji, L Huang, X Zhang, S Shen, R Gao, S Wu, ... Nature communications 5 (1), 3102, 2014 | 51 | 2014 |
| The inner membrane protein YhdP modulates the rate of anterograde phospholipid flow in Escherichia coli J Grimm, H Shi, W Wang, AM Mitchell, NS Wingreen, KC Huang, ... Proceedings of the National Academy of Sciences 117 (43), 26907-26914, 2020 | 50 | 2020 |
| Morphological and transcriptional responses to CRISPRi knockdown of essential genes in Escherichia coli MR Silvis, M Rajendram, H Shi, H Osadnik, AN Gray, S Cesar, JM Peters, ... MBio 12 (5), 10.1128/mbio. 02561-21, 2021 | 43 | 2021 |
| Environmental and physiological factors affecting high-throughput measurements of bacterial growth E Atolia, S Cesar, HA Arjes, M Rajendram, H Shi, BD Knapp, S Khare, ... MBio 11 (5), 10.1128/mbio. 01378-20, 2020 | 43 | 2020 |
| Strain Library Imaging Protocol for high-throughput, automated single-cell microscopy of large bacterial collections arrayed on multiwell plates H Shi, A Colavin, TK Lee, KC Huang Nature Protocols 12 (2), 429-438, 2017 | 38 | 2017 |
| Chiral twisting in a bacterial cytoskeletal polymer affects filament size and orientation H Shi, DA Quint, GM Grason, A Gopinathan, KC Huang Nature communications 11 (1), 1408, 2020 | 37 | 2020 |
| Automated design of genetic toggle switches with predetermined bistability S Chen, H Zhang, H Shi, W Ji, J Feng, Y Gong, Z Yang, Q Ouyang ACS synthetic Biology 1 (7), 284-290, 2012 | 36 | 2012 |
| Precise regulation of the relative rates of surface area and volume synthesis in bacterial cells growing in dynamic environments H Shi, Y Hu, PD Odermatt, CG Gonzalez, L Zhang, JE Elias, F Chang, ... Nature communications 12 (1), 1975, 2021 | 35 | 2021 |
Kerwyn Casey HuangAssociate Professor of Bioengineering, Stanford UniversityVerified email at stanford.edu
