| DECIPHER, a search-based approach to chimera identification for 16S rRNA sequences ES Wright, LS Yilmaz, DR Noguera Applied and environmental microbiology 78 (3), 717-725, 2012 | 756 | 2012 |
| Interspecies systems biology uncovers metabolites affecting C. elegans gene expression and life history traits E Watson, LT MacNeil, AD Ritter, LS Yilmaz, AP Rosebrock, AA Caudy, ... Cell 156 (4), 759-770, 2014 | 266 | 2014 |
| Bacterial metabolism affects the C. elegans response to cancer chemotherapeutics AP García-González, AD Ritter, S Shrestha, EC Andersen, LS Yilmaz, ... Cell 169 (3), 431-441. e8, 2017 | 240 | 2017 |
| mathFISH, a web tool that uses thermodynamics-based mathematical models for in silico evaluation of oligonucleotide probes for fluorescence in situ hybridization LS Yilmaz, S Parnerkar, DR Noguera Applied and Environmental Microbiology 77 (3), 1118-1122, 2011 | 201 | 2011 |
| Mechanistic approach to the problem of hybridization efficiency in fluorescent in situ hybridization LS Yilmaz, DR Noguera Applied and Environmental Microbiology 70 (12), 7126-7139, 2004 | 148 | 2004 |
| Quantification of target molecules needed to detect microorganisms by fluorescence in situ hybridization (FISH) and catalyzed reporter deposition-FISH T Hoshino, LS Yilmaz, DR Noguera, H Daims, M Wagner Applied and Environmental Microbiology 74 (16), 5068-5077, 2008 | 144 | 2008 |
| Making All Parts of the 16S rRNA of Escherichia coli Accessible In Situ to Single DNA Oligonucleotides LS Yilmaz, HE Okten, DR Noguera Applied and environmental microbiology 72 (1), 733-744, 2006 | 110 | 2006 |
| A Caenorhabditis elegans genome-scale metabolic network model LS Yilmaz, AJM Walhout Cell systems 2 (5), 297-311, 2016 | 99 | 2016 |
| Worms, bacteria, and micronutrients: an elegant model of our diet LS Yilmaz, AJM Walhout Trends in Genetics 30 (11), 496-503, 2014 | 91 | 2014 |
| Exploiting extension bias in polymerase chain reaction to improve primer specificity in ensembles of nearly identical DNA templates ES Wright, LS Yilmaz, S Ram, JM Gasser, GW Harrington, DR Noguera Environmental microbiology 16 (5), 1354-1365, 2014 | 87 | 2014 |
| Metabolic network modeling with model organisms LS Yilmaz, AJM Walhout Current opinion in chemical biology 36, 32-39, 2017 | 59 | 2017 |
| A delicate balance between bacterial iron and reactive oxygen species supports optimal C. elegans development J Zhang, X Li, M Olmedo, AD Holdorf, Y Shang, M Artal-Sanz, LS Yilmaz, ... Cell host & microbe 26 (3), 400-411. e3, 2019 | 58 | 2019 |
| Automated Design of Probes for rRNA-Targeted Fluorescence In Situ Hybridization Reveals the Advantages of Using Dual Probes for Accurate Identification ES Wright, LS Yilmaz, AM Corcoran, HE Ökten, DR Noguera Applied and environmental microbiology 80 (16), 5124-5133, 2014 | 55 | 2014 |
| Understanding metabolic regulation at a systems level: metabolite sensing, mathematical predictions, and model organisms E Watson, LS Yilmaz, AJM Walhout Annual review of genetics 49 (1), 553-575, 2015 | 54 | 2015 |
| A persistence detector for metabolic network rewiring in an animal JT Bulcha, GE Giese, MZ Ali, YU Lee, MD Walker, AD Holdorf, LS Yilmaz, ... Cell reports 26 (2), 460-468. e4, 2019 | 49 | 2019 |
| A balance between inhibitor binding and substrate processing confers influenza drug resistance L Jiang, P Liu, C Bank, N Renzette, K Prachanronarong, LS Yilmaz, ... Journal of molecular biology 428 (3), 538-553, 2016 | 42 | 2016 |
| Modeling tissue‐relevant Caenorhabditis elegans metabolism at network, pathway, reaction, and metabolite levels LS Yilmaz, X Li, S Nanda, B Fox, F Schroeder, AJM Walhout Molecular Systems Biology 16 (10), e9649, 2020 | 35 | 2020 |
| Systematic evaluation of single mismatch stability predictors for fluorescence in situ hybridization LS Yilmaz, LI Bergsven, DR Noguera Environmental microbiology 10 (10), 2872-2885, 2008 | 34 | 2008 |
| Mathematical tools to optimize the design of oligonucleotide probes and primers DR Noguera, ES Wright, P Camejo, LS Yilmaz Applied microbiology and biotechnology 98, 9595-9608, 2014 | 29 | 2014 |
| Molecular basis for differential patterns of drug resistance in influenza N1 and N2 neuraminidase KL Prachanronarong, A Özen, KM Thayer, LS Yilmaz, KB Zeldovich, ... Journal of chemical theory and computation 12 (12), 6098-6108, 2016 | 25 | 2016 |
