Cancer cell population growth kinetics at low densities deviate from the exponential growth model and suggest an Allee effect KE Johnson, G Howard, W Mo, MK Strasser, EABF Lima, S Huang, ... PLoS biology 17 (8), e3000399, 2019 | 112 | 2019 |
Multifunctional barcoding with ClonMapper enables high-resolution study of clonal dynamics during tumor evolution and treatment C Gutierrez, AM Al’Khafaji, E Brenner, KE Johnson, SH Gohil, Z Lin, ... Nature cancer 2 (7), 758-772, 2021 | 77 | 2021 |
SARS-CoV-2 viral load is associated with risk of transmission to household and community contacts D Bhavnani, ER James, KE Johnson, S Beaudenon-Huibregtse, P Chang, ... BMC Infectious Diseases 22 (1), 672, 2022 | 34 | 2022 |
A multi-state model of chemoresistance to characterize phenotypic dynamics in breast cancer GR Howard, KE Johnson, A Rodriguez Ayala, TE Yankeelov, A Brock Scientific reports 8 (1), 12058, 2018 | 34 | 2018 |
Individually optimal choices can be collectively disastrous in COVID-19 disease control M Stoddard, D Van Egeren, KE Johnson, S Rao, J Furgeson, DE White, ... BMC public health 21, 1-12, 2021 | 29 | 2021 |
Integrating quantitative assays with biologically based mathematical modeling for predictive oncology AS Kazerouni, M Gadde, A Gardner, DA Hormuth, AM Jarrett, KE Johnson, ... Iscience 23 (12), 2020 | 28 | 2020 |
Integrating transcriptomics and bulk time course data into a mathematical framework to describe and predict therapeutic resistance in cancer KE Johnson, GR Howard, D Morgan, EA Brenner, AL Gardner, RE Durrett, ... Physical Biology 18 (1), 016001, 2020 | 24 | 2020 |
Effects of COVID-19 vaccination timing and risk prioritization on mortality rates, United States X Wang, Z Du, KE Johnson, RF Pasco, SJ Fox, M Lachmann, JS McLellan, ... Emerging Infectious Diseases 27 (7), 1976, 2021 | 20 | 2021 |
In the long shadow of our best intentions: model-based assessment of the consequences of school reopening during the COVID-19 pandemic KE Johnson, M Stoddard, RP Nolan, DE White, NS Hochberg, ... Plos one 16 (3), e0248509, 2021 | 18 | 2021 |
Directional inconsistency between Response Evaluation Criteria in Solid Tumors (RECIST) time to progression and response speed and depth K Johnson, A Gomez, J Burton, D White, A Chakravarty, A Schmid, ... European Journal of Cancer 109, 196-203, 2019 | 13 | 2019 |
The impacts of COVID-19 vaccine timing, number of doses, and risk prioritization on mortality in the US X Wang, Z Du, KE Johnson, RF Pasco, SJ Fox, M Lachmann, JS McLellan, ... medRxiv, 2021 | 9 | 2021 |
Expressed barcodes enable clonal characterization of chemotherapeutic responses in chronic lymphocytic leukemia A Al’Khafaji, C Gutierrez, E Brenner, R Durrett, KE Johnson, W Zhang, ... bioRxiv, 761981, 2019 | 8 | 2019 |
Integrating multimodal data sets into a mathematical framework to describe and predict therapeutic resistance in cancer K Johnson, GR Howard, D Morgan, EA Brenner, AL Gardner, RE Durrett, ... bioRxiv, 2020.02. 11.943738, 2020 | 7 | 2020 |
Spatial distribution of COVID-19 infections and vaccinations in Austin, Texas S Woody, E Javan, K Johnson, R Pasco, M Johnson-León, M Lachmann, ... | 6 | 2021 |
This time is different: model-based evaluation of the implications of SARS-CoV-2 infection kinetics for disease control KE Johnson, M Stoddard, RP Nolan, DE White, N Hochberg, ... medRxiv, 2020.08. 19.20177550, 2020 | 6 | 2020 |
Detecting in-school transmission of SARS-CoV-2 from case ratios and documented clusters K Johnson, M Lachmann, M Stoddard, R Pasco, SJ Fox, LA Meyers, ... medRxiv, 2021 | 5 | 2021 |
Model-based evaluation of the impact of noncompliance with public health measures on COVID-19 disease control M Stoddard, D Van Egeren, K Johnson, S Rao, J Furgeson, DE White, ... medRxiv, 2020.11. 29.20240440, 2020 | 5 | 2020 |
Disproportionate impacts of COVID-19 in a large US city SJ Fox, E Javan, R Pasco, GC Gibson, B Betke, JL Herrera-Diestra, ... PLOS Computational Biology 19 (6), e1011149, 2023 | 4 | 2023 |
Leveraging global genomic sequencing data to estimate local variant dynamics Z Susswein, KE Johnson, R Kassa, M Parastaran, V Peng, L Wolansky, ... | 4 | 2023 |
Optimizing COVID-19 testing strategies on college campuses: evaluation of the health and economic costs KE Johnson, R Pasco, S Woody, M Lachmann, M Johnson-Leon, ... PLOS Computational Biology 19 (12), e1011715, 2023 | 3 | 2023 |