Theo dõi
Peggy J. Farnham
Peggy J. Farnham
WIlliam M Keck Professor of Biochemistry, University of Southern California
Email được xác minh tại usc.edu
Tiêu đề
Trích dẫn bởi
Trích dẫn bởi
Năm
An integrated encyclopedia of DNA elements in the human genome
BE Bernstein, E Birney, I Dunham, ED Green, C Gunter, M Snyder
Nature 489 (7414), 57-74, 2012
13893*2012
Identification and analysis of functional elements in 1% of the human genome by the ENCODE pilot project
Management Group Liefer Laura A. 51 Wetterstrand Kris A. 51 Good Peter J. 51 ...
nature 447 (7146), 799-816, 2007
60102007
Integrative analysis of 111 reference human epigenomes
A Kundaje, W Meuleman, J Ernst, M Bilenky, A Yen, A Heravi-Moussavi, ...
Nature 518 (7539), 317-330, 2015
59912015
Functional demarcation of active and silent chromatin domains in human HOX loci by noncoding RNAs
JL Rinn, M Kertesz, JK Wang, SL Squazzo, X Xu, SA Brugmann, ...
cell 129 (7), 1311-1323, 2007
49942007
An integrated encyclopedia of DNA elements in the human genome
ENCODE Project Consortium Overall coordination (data analysis coordination ...
Nature 489 (7414), 57-74, 2012
30772012
The ENCODE (ENCyclopedia of DNA elements) project
EA Feingold, PJ Good, MS Guyer, S Kamholz, L Liefer, K Wetterstrand, ...
Science 306 (5696), 636-640, 2004
23722004
ChIP-seq guidelines and practices of the ENCODE and modENCODE consortia
SG Landt, GK Marinov, A Kundaje, P Kheradpour, F Pauli, S Batzoglou, ...
Genome research 22 (9), 1813-1831, 2012
22062012
The NIH roadmap epigenomics mapping consortium
BE Bernstein, JA Stamatoyannopoulos, JF Costello, B Ren, ...
Nature biotechnology 28 (10), 1045-1048, 2010
18602010
Architecture of the human regulatory network derived from ENCODE data
MB Gerstein, A Kundaje, M Hariharan, SG Landt, KK Yan, C Cheng, ...
Nature 489 (7414), 91-100, 2012
16472012
Expanded encyclopaedias of DNA elements in the human and mouse genomes
JE Moore, MJ Purcaro, HE Pratt, CB Epstein, N Shoresh, J Adrian, T Kawli, ...
Nature 583 (7818), 699-710, 2020
11762020
Expression cloning of a cDNA encoding a retinoblastoma-binding protein with E2F-like properties
WG Kaelin Jr, W Krek, WR Sellers, JA DeCaprio, F Ajchenbaum, ...
Cell 70 (2), 351-364, 1992
10601992
T-bet regulates the terminal maturation and homeostasis of NK and Vα14i NKT cells
MJ Townsend, AS Weinmann, JL Matsuda, R Salomon, PJ Farnham, ...
Immunity 20 (4), 477-494, 2004
8912004
Defining functional DNA elements in the human genome
M Kellis, B Wold, MP Snyder, BE Bernstein, A Kundaje, GK Marinov, ...
Proceedings of the National Academy of Sciences 111 (17), 6131-6138, 2014
8642014
Comparison of sequencing-based methods to profile DNA methylation and identification of monoallelic epigenetic modifications
RA Harris, T Wang, C Coarfa, RP Nagarajan, C Hong, SL Downey, ...
Nature biotechnology 28 (10), 1097-1105, 2010
7592010
Insights from genomic profiling of transcription factors
PJ Farnham
Nature Reviews Genetics 10 (9), 605-616, 2009
6642009
Silencing of human polycomb target genes is associated with methylation of histone H3 Lys 27
A Kirmizis, SM Bartley, A Kuzmichev, R Margueron, D Reinberg, R Green, ...
Genes & development 18 (13), 1592-1605, 2004
6172004
Isolating human transcription factor targets by coupling chromatin immunoprecipitation and CpG island microarray analysis
AS Weinmann, PS Yan, MJ Oberley, THM Huang, PJ Farnham
Genes & development 16 (2), 235-244, 2002
6022002
Composition and histone substrates of polycomb repressive group complexes change during cellular differentiation
A Kuzmichev, R Margueron, A Vaquero, TS Preissner, M Scher, A Kirmizis, ...
Proceedings of the National Academy of Sciences 102 (6), 1859-1864, 2005
5382005
Use of chromatin immunoprecipitation to clone novel E2F target promoters
AS Weinmann, SM Bartley, T Zhang, MQ Zhang, PJ Farnham
Molecular and cellular biology 21 (20), 6820-6832, 2001
4842001
Integrated epigenomic analyses of neuronal MeCP2 reveal a role for long-range interaction with active genes
DH Yasui, S Peddada, MC Bieda, RO Vallero, A Hogart, RP Nagarajan, ...
Proceedings of the National Academy of Sciences 104 (49), 19416-19421, 2007
4492007
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