Alexei Soares
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Structural and mechanistic studies on the inhibition of the hypoxia-inducible transcription factor hydroxylases by tricarboxylic acid cycle intermediates
KS Hewitson, BMR Liénard, MA McDonough, IJ Clifton, D Butler, ...
Journal of Biological Chemistry 282 (5), 3293-3301, 2007
Quantitative assessment of peptide sequence diversity in M13 combinatorial peptide phage display libraries
DJ Rodi, AS Soares, L Makowski
Journal of molecular biology 322 (5), 1039-1052, 2002
Matrix metalloproteinase-10 (MMP-10) interaction with tissue inhibitors of metalloproteinases TIMP-1 and TIMP-2
J Batra, J Robinson, AS Soares, AP Fields, DC Radisky, ES Radisky
Journal of Biological Chemistry 287 (19), 15935-15946, 2012
Fragment binding to the Nsp3 macrodomain of SARS-CoV-2 identified through crystallographic screening and computational docking
M Schuller, GJ Correy, S Gahbauer, D Fearon, T Wu, RE Díaz, ID Young, ...
Science advances 7 (16), eabf8711, 2021
Acoustic injectors for drop-on-demand serial femtosecond crystallography
CG Roessler, R Agarwal, M Allaire, R Alonso-Mori, B Andi, JFR Bachega, ...
Structure 24 (4), 631-640, 2016
Crystal structures of the nitrite and nitric oxide complexes of horse heart myoglobin
DM Copeland, AS Soares, AH West, GB Richter-Addo
Journal of inorganic biochemistry 100 (8), 1413-1425, 2006
Structural basis for NADH/NAD+ redox sensing by a Rex family repressor
KJ McLaughlin, CM Strain-Damerell, K Xie, D Brekasis, AS Soares, ...
Molecular cell 38 (4), 563-575, 2010
Acoustic methods for high-throughput protein crystal mounting at next-generation macromolecular crystallographic beamlines
CG Roessler, A Kuczewski, R Stearns, R Ellson, J Olechno, AM Orville, ...
Journal of synchrotron radiation 20 (5), 805-808, 2013
Structural basis for accelerated cleavage of bovine pancreatic trypsin inhibitor (BPTI) by human mesotrypsin
S Moh'd A, AS Soares, A Hockla, ES Radisky
Journal of biological chemistry 283 (7), 4115-4123, 2008
Crystal structure of a complex between the phosphorelay protein YPD1 and the response regulator domain of SLN1 bound to a phosphoryl analog
X Zhao, DM Copeland, AS Soares, AH West
Journal of molecular biology 375 (4), 1141-1151, 2008
The structures of penicillin-binding protein 4 (PBP4) and PBP5 from Enterococci provide structural insights into β-lactam resistance
TM Moon, ÉD D’Andréa, CW Lee, A Soares, J Jakoncic, C Desbonnet, ...
Journal of Biological Chemistry 293 (48), 18574-18584, 2018
Acoustically mounted microcrystals yield high-resolution X-ray structures
AS Soares, MA Engel, R Stearns, S Datwani, J Olechno, R Ellson, ...
Biochemistry 50 (21), 4399-4401, 2011
Hitting the target: fragment screening with acoustic in situ co-crystallization of proteins plus fragment libraries on pin-mounted data-collection micromeshes
X Yin, A Scalia, L Leroy, CM Cuttitta, GM Polizzo, DL Ericson, ...
Acta Crystallographica Section D: Biological Crystallography 70 (5), 1177-1189, 2014
Estimating the diversity of peptide populations from limited sequence data
L Makowski, A Soares
Bioinformatics 19 (4), 483-489, 2003
Determinants of affinity and proteolytic stability in interactions of Kunitz family protease inhibitors with mesotrypsin
S Moh'd A, AS Soares, D Navaneetham, D Sinha, PN Walsh, ES Radisky
Journal of biological chemistry 285 (47), 36884-36896, 2010
Matrix metalloproteinase-10/TIMP-2 structure and analyses define conserved core interactions and diverse exosite interactions in MMP/TIMP complexes
J Batra, AS Soares, C Mehner, ES Radisky
PLoS one 8 (9), e75836, 2013
The P2′ residue is a key determinant of mesotrypsin specificity: engineering a high-affinity inhibitor with anticancer activity
MA Salameh, AS Soares, A Hockla, DC Radisky, ES Radisky
Biochemical Journal 440 (1), 95-105, 2011
Long-range electrostatic complementarity governs substrate recognition by human chymotrypsin C, a key regulator of digestive enzyme activation
J Batra, A Szabó, TR Caulfield, AS Soares, M Sahin-Toth, ES Radisky
Journal of Biological Chemistry 288 (14), 9848-9859, 2013
Sequence and conformational specificity in substrate recognition: several human Kunitz protease inhibitor domains are specific substrates of mesotrypsin
D Pendlebury, R Wang, RD Henin, A Hockla, AS Soares, BJ Madden, ...
Journal of Biological Chemistry 289 (47), 32783-32797, 2014
Fragment-based identification of determinants of conformational and spectroscopic change at the ricin active site
JH Carra, CA McHugh, S Mulligan, LAM Machiesky, AS Soares, ...
BMC structural biology 7 (1), 1-11, 2007
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