Caroline Baroukh
Caroline Baroukh
CR LIPM INRAE Occitanie (Toulouse)
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ESCAPE: database for integrating high-content published data collected from human and mouse embryonic stem cells
H Xu, C Baroukh, R Dannenfelser, EY Chen, CM Tan, Y Kou, YE Kim, ...
Database: the journal of biological databases and curation 2013, 2013
DRUM: a new framework for metabolic modeling under non-balanced growth. Application to the carbon metabolism of unicellular microalgae
C Baroukh, R Muñoz-Tamayo, JP Steyer, O Bernard
Use of fermentative metabolites for heterotrophic microalgae growth: Yields and kinetics
V Turon, C Baroukh, E Trably, E Latrille, E Fouilland, JP Steyer
Bioresource technology 175, 342-349, 2015
A state of the art of metabolic networks of unicellular microalgae and cyanobacteria for biofuel production
C Baroukh, R Muñoz-Tamayo, JP Steyer, O Bernard
Metabolic engineering 30, 49-60, 2015
Polyamines: double agents in disease and plant immunity
L Gerlin, C Baroukh, S Genin
Trends in Plant Science 26 (10), 1061-1071, 2021
Bayesian optimization with dimension scheduling: Application to biological systems
D Ulmasov, C Baroukh, B Chachuat, MP Deisenroth, R Misener
Computer Aided Chemical Engineering 38, 1051-1056, 2016
Dynamic metabolic modeling of heterotrophic and mixotrophic microalgal growth on fermentative wastes
C Baroukh, V Turon, O Bernard
PLOS Computational Biology 13 (6), e1005590, 2017
Mathematical modeling of unicellular microalgae and cyanobacteria metabolism for biofuel production
C Baroukh, R Muñoz-Tamayo, O Bernard, JP Steyer
Current Opinion in Biotechnology 33, 198-205, 2015
Genes2WordCloud: a quick way to identify biological themes from gene lists and free text.
C Baroukh, SL Jenkins, R Dannenfelser, A Ma'ayan
Source code for biology and medicine 6 (15), 1-5, 2011
Unravelling physiological signatures of tomato bacterial wilt and xylem metabolites exploited by Ralstonia solanacearum
L Gerlin, A Escourrou, C Cassan, F Maviane Macia, N Peeters, S Genin, ...
Environmental Microbiology 23 (10), 5962-5978, 2021
Draft genomes and phenotypic characterization of Tisochrysis lutea strains. Toward the production of domesticated strains with high added value
G Carrier, C Baroukh, C Rouxel, L Duboscq-Bidot, N Schreiber, ...
Algal Research 29, 1-11, 2018
Genome-scale investigation of the metabolic determinants generating bacterial fastidious growth
L Gerlin, L Cottret, S Cesbron, G Taghouti, MA Jacques, S Genin, ...
MSystems 5 (2), 10.1128/msystems. 00698-19, 2020
Trophic preferences of the pathogen Ralstonia solanacearum and consequences on its growth in xylem sap
C Baroukh, M Zemouri, S Genin
MicrobiologyOpen 11 (1), e1240, 2022
The fucoxanthin chlorophyll a/c-binding protein in tisochrysis lutea: influence of nitrogen and light on fucoxanthin and chlorophyll a/c-binding protein gene expression and …
A Pajot, J Lavaud, G Carrier, M Garnier, B Saint-Jean, N Rabilloud, ...
Frontiers in Plant Science 13, 830069, 2022
Metabolic modeling of C. sorokiniana diauxic heterotrophic growth
C Baroukh, O Bernard
IFAC-PapersOnLine 49 (26), 330-335, 2016
Combining graph and flux-based structures to decipher phenotypic essential metabolites within metabolic networks
J Laniau, C Frioux, J Nicolas, C Baroukh, MP Cortes, J Got, C Trottier, ...
PeerJ 5, e3860, 2017
dynamic Flux Balance Analysis of the Metabolism of Microalgae under a Diurnal Light Cycle
C Baroukh, JP Steyer, O Bernard, B Chachuat
IFAC-PapersOnLine 49 (7), 791-796, 2016
A multi-organ metabolic model of tomato predicts plant responses to nutritional and genetic perturbations
L Gerlin, L Cottret, A Escourrou, S Genin, C Baroukh
Plant Physiology 188 (3), 1709-1723, 2022
A new framework for metabolic modeling under non-balanced growth. Application to carbon metabolism of unicellular microalgae
C Baroukh, R Muñoz-Tamayo, JP Steyer, O Bernard
Computer Applied to Biotechnology, 2013
A universal dynamical metabolic model representing mixotrophic growth of Chlorella sp. on wastes
BA Pessi, C Baroukh, A Bacquet, O Bernard
Water Research 229, 119388, 2023
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