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Vaughn Cooper
Vaughn Cooper
University of Pittsburgh, Department of Microbiology and Molecular Genetics
Verified email at pitt.edu - Homepage
Title
Cited by
Cited by
Year
The population genetics of ecological specialization in evolving Escherichia coli populations
VS Cooper, RE Lenski
Nature 407 (6805), 736-739, 2000
6162000
Punctuated evolution caused by selection of rare beneficial mutations
SF Elena, VS Cooper, RE Lenski
Science 272 (5269), 1802-1804, 1996
4181996
Mechanisms Causing Rapid and Parallel Losses of Ribose Catabolism in Evolving Populations of Escherichia coli B
VS Cooper, D Schneider, M Blot, RE Lenski
Journal of Bacteriology 183 (9), 2834-2841, 2001
3412001
Ceftolozane-Tazobactam for the Treatment of Multidrug-Resistant Pseudomonas aeruginosa Infections: Clinical Effectiveness and Evolution of Resistance
G Haidar, NJ Philips, RK Shields, D Snyder, S Cheng, BA Potoski, Y Doi, ...
Clinical Infectious Diseases 65 (1), 110-120, 2017
2572017
Tradeoff between horizontal and vertical modes of transmission in bacterial plasmids
PE Turner, VS Cooper, RE Lenski
Evolution 52 (2), 315-329, 1998
2381998
EVOLUTION OF THERMAL DEPENDENCE OF GROWTH RATE OF ESCHERICHIA COLI POPULATIONS DURING 20,000 GENERATIONS IN A CONSTANT …
VS Cooper, AF Bennett, RE Lenski
Evolution 55 (5), 889-896, 2001
2042001
Tangled bank of experimentally evolved Burkholderia biofilms reflects selection during chronic infections
CC Traverse, LM Mayo-Smith, SR Poltak, VS Cooper
Proceedings of the National Academy of Sciences 110 (3), E250-E259, 2013
1982013
Ecological succession in long-term experimentally evolved biofilms produces synergistic communities
SR Poltak, VS Cooper
The ISME journal 5 (3), 369-378, 2011
1902011
Why genes evolve faster on secondary chromosomes in bacteria
VS Cooper, SH Vohr, SC Wrocklage, PJ Hatcher
PLoS computational biology 6 (4), e1000732, 2010
1432010
Evolutionary pathways to antibiotic resistance are dependent upon environmental structure and bacterial lifestyle
A Santos-Lopez, CW Marshall, MR Scribner, DJ Snyder, VS Cooper
Elife 8, e47612, 2019
1402019
Role of bacterial motility in differential resistance mechanisms of silver nanoparticles and silver ions
LM Stabryla, KA Johnston, NA Diemler, VS Cooper, JE Millstone, SJ Haig, ...
Nature nanotechnology 16 (9), 996-1003, 2021
1322021
Emergence in late 2020 of multiple lineages of SARS-CoV-2 Spike protein variants affecting amino acid position 677
EB Hodcroft, DB Domman, DJ Snyder, KY Oguntuyo, M Van Diest, ...
MedRxiv, 2021
1252021
The environment affects epistatic interactions to alter the topology of an empirical fitness landscape
KM Flynn, TF Cooper, FBG Moore, VS Cooper
PLoS genetics 9 (4), e1003426, 2013
1102013
Genome-wide analysis of influenza viral RNA and nucleoprotein association
N Lee, V Le Sage, AV Nanni, DJ Snyder, VS Cooper, SS Lakdawala
Nucleic acids research 45 (15), 8968-8977, 2017
1022017
Systematic detection of horizontal gene transfer across genera among multidrug-resistant bacteria in a single hospital
DR Evans, MP Griffith, AJ Sundermann, KA Shutt, MI Saul, MM Mustapha, ...
Elife 9, e53886, 2020
1012020
Long-term evolution of Burkholderia multivorans during a chronic cystic fibrosis infection reveals shifting forces of selection
IN Silva, PM Santos, MR Santos, JEA Zlosnik, DP Speert, SW Buskirk, ...
MSystems 1 (3), 10.1128/msystems. 00029-16, 2016
96*2016
Evolution of the insertion-deletion mutation rate across the tree of life
W Sung, MS Ackerman, MM Dillon, TG Platt, C Fuqua, VS Cooper, ...
G3: Genes, Genomes, Genetics 6 (8), 2583-2591, 2016
922016
Rapid phenotypic change and diversification of a soil bacterium during 1000 generations of experimental evolution
MS Riley, VS Cooper, RE Lenski, LJ Forney, TL Marsh
Microbiology 147 (4), 995-1006, 2001
872001
Experimental evolution as a high-throughput screen for genetic adaptations
VS Cooper
MSphere 3 (3), 10.1128/msphere. 00121-18, 2018
852018
RelA Mutant Enterococcus faecium with Multiantibiotic Tolerance Arising in an Immunocompromised Host
ES Honsa, VS Cooper, MN Mhaissen, M Frank, J Shaker, A Iverson, ...
MBio 8 (1), 10.1128/mbio. 02124-16, 2017
832017
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