Making sense of big data in health research: towards an EU action plan C Auffray, R Balling, I Barroso, L Bencze, M Benson, J Bergeron, ... Genome medicine 8, 1-13, 2016 | 353 | 2016 |
Molecular Dynamics Simulations of the 136 Unique Tetranucleotide Sequences of DNA Oligonucleotides. I. Research Design and Results on d(CpG) Steps DL Beveridge, G Barreiro, K Suzie Byun, DA Case, TE Cheatham III, ... Biophysical journal 87 (6), 3799-3813, 2004 | 327 | 2004 |
DNA and its counterions: a molecular dynamics study P Varnai, K Zakrzewska Nucleic acids research 32 (14), 4269-4280, 2004 | 311 | 2004 |
Molecular dynamics simulations of the 136 unique tetranucleotide sequences of DNA oligonucleotides. II: sequence context effects on the dynamical structures of the 10 unique … SB Dixit, DL Beveridge, DA Case, TE Cheatham, E Giudice, F Lankas, ... Biophysical journal 89 (6), 3721-3740, 2005 | 278 | 2005 |
A G-Rich Sequence within the c-kit Oncogene Promoter Forms a Parallel G-Quadruplex Having Asymmetric G-Tetrad Dynamics STD Hsu, P Varnai, A Bugaut, AP Reszka, S Neidle, S Balasubramanian Journal of the American Chemical Society 131 (37), 13399-13409, 2009 | 247 | 2009 |
Determination of the free energy landscape of α-synuclein using spin label nuclear magnetic resonance measurements JR Allison, P Varnai, CM Dobson, M Vendruscolo Journal of the American Chemical Society 131 (51), 18314-18326, 2009 | 228 | 2009 |
Periplasmic arabinogalactan glycoproteins act as a calcium capacitor that regulates plant growth and development DTA Lamport, P Várnai New Phytologist 197 (1), 58-64, 2013 | 219 | 2013 |
Base pair opening within B‐DNA: free energy pathways for GC and AT pairs from umbrella sampling simulations E Giudice, P Várnai, R Lavery Nucleic acids research 31 (5), 1434-1443, 2003 | 194 | 2003 |
The MUMO (minimal under-restraining minimal over-restraining) method for the determination of native state ensembles of proteins B Richter, J Gsponer, P Várnai, X Salvatella, M Vendruscolo Journal of biomolecular NMR 37, 117-135, 2007 | 160 | 2007 |
Plant O-hydroxyproline arabinogalactans are composed of repeating trigalactosyl subunits with short bifurcated side chains L Tan, P Varnai, DTA Lamport, C Yuan, J Xu, F Qiu, MJ Kieliszewski Journal of Biological Chemistry 285 (32), 24575-24583, 2010 | 131 | 2010 |
α/γ Transitions in the B‐DNA backbone P Várnai, D Djuranovic, R Lavery, B Hartmann Nucleic acids research 30 (24), 5398-5406, 2002 | 128 | 2002 |
Base flipping in DNA: pathways and energetics studied with molecular dynamic simulations P Várnai, R Lavery Journal of the American Chemical Society 124 (25), 7272-7273, 2002 | 110 | 2002 |
About the aromaticity of five-membered heterocycles L Nyulászi, P Várnai, T Veszprémi Journal of Molecular Structure: THEOCHEM 358 (1-3), 55-61, 1995 | 107 | 1995 |
Back to the future with the AGP–Ca2+ flux capacitor DTA Lamport, P Varnai, CE Seal Annals of Botany 114 (6), 1069-1085, 2014 | 105 | 2014 |
Ab initio QM/MM dynamics simulation of the tetrahedral intermediate of serine proteases: insights into the active site hydrogen-bonding network M Topf, P Várnai, WG Richards Journal of the American Chemical Society 124 (49), 14780-14788, 2002 | 99 | 2002 |
Opening Mechanism of G.T/U Pairs in DNA and RNA Duplexes: A Combined Study of Imino Proton Exchange and Molecular Dynamics Simulation P Várnai, M Canalia, JL Leroy Journal of the American Chemical Society 126 (44), 14659-14667, 2004 | 83 | 2004 |
Computer simulation studies of the catalytic mechanism of human aldose reductase P Várnai, A Warshel Journal of the American Chemical Society 122 (16), 3849-3860, 2000 | 75 | 2000 |
Energetic and conformational aspects of A:T base‐pair opening within the DNA double helix E Giudice, P Várnai, R Lavery ChemPhysChem 2 (11), 673-677, 2001 | 60 | 2001 |
Differential stability of DNA crossovers in solution mediated by divalent cations P Varnai, Y Timsit Nucleic acids research 38 (12), 4163-4172, 2010 | 53 | 2010 |
Modelling the catalytic reaction in human aldose reductase P Várnai, WG Richards, PD Lyne Proteins: Structure, Function, and Bioinformatics 37 (2), 218-227, 1999 | 51 | 1999 |