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Anna Kuchina
Anna Kuchina
Institute for Systems Biology
Verified email at isbscience.org - Homepage
Title
Cited by
Cited by
Year
Single-cell profiling of the developing mouse brain and spinal cord with split-pool barcoding
AB Rosenberg, CM Roco, RA Muscat, A Kuchina, P Sample, Z Yao, ...
Science 360 (6385), 176-182, 2018
12592018
Microbial single-cell RNA sequencing by split-pool barcoding
A Kuchina, LM Brettner, L Paleologu, CM Roco, AB Rosenberg, ...
Science 371 (6531), eaba5257, 2021
2192021
Deep learning of the regulatory grammar of yeast 5' untranslated regions from 500,000 random sequences.
SFGS Josh T. Cuperus, Benjamin Groves, Anna Kuchina, Alexander B. Rosenberg ...
Genome Research, 2017
2122017
Chromosomal arrangement of phosphorelay genes couples sporulation and DNA replication
J Narula, A Kuchina, DL Dong-yeon, M Fujita, GM Süel, OA Igoshin
Cell 162 (2), 328-337, 2015
1032015
Temporal competition between differentiation programs determines cell fate choice
A Kuchina, L Espinar, T Cagatay, A Balbin, A Alvarado, F Zhang, ...
Molecular Systems Biology 7 (1), 2011
922011
Combinatorial photo-controlled spatial sequencing and labeling
G Seelig, A Kuchina, AB Rosenberg
US Patent 10,633,648, 2020
772020
Reversible and noisy progression towards a commitment point enables adaptable and reliable cellular decision-making
A Kuchina, L Espinar, J Garcia-Ojalvo, GM Süel
PLoS computational biology 7 (11), e1002273, 2011
492011
Slowdown of growth controls cellular differentiation
J Narula, A Kuchina, F Zhang, M Fujita, GM Süel, OA Igoshin
Molecular systems biology 12 (5), 871, 2016
422016
SPLiT-seq reveals cell types and lineages in the developing brain and spinal cord
AB Rosenberg, CM Roco, RA Muscat, A Kuchina, P Sample, Z Yao, ...
Science (New York, NY) 360 (6385), 176, 2018
192018
Inverse Gillespie for inferring stochastic reaction mechanisms from intermittent samples
I Chattopadhyay, A Kuchina, GM Süel, H Lipson
Proceedings of the National Academy of Sciences 110 (32), 12990-12995, 2013
162013
High-throughput single-cell transcriptomics of bacteria using combinatorial barcoding
KD Gaisser, SN Skloss, LM Brettner, L Paleologu, CM Roco, ...
Nature Protocols, 1-37, 2024
12024
Single-cell RNA sequencing reveals plasmid constrains bacterial population heterogeneity and identifies a non-conjugating subpopulation
V Cyriaque, R Ibarra-Chávez, A Kuchina, G Seelig, J Nesme, JS Madsen
Nature Communications 15 (1), 5853, 2024
2024
Method for preparation and high-throughput microbial single-cell rna sequencing of bacteria
G Seelig, A Kuchina, L Brettner, W DePaolo
US Patent App. 18/415,802, 2024
2024
Method for preparation and high-throughput microbial single-cell rna sequencing of bacteria
G Seelig, A Kuchina, L Brettner, W DePaolo
US Patent App. 18/406,472, 2024
2024
Single-cell RNA sequencing suggests plasmids constrain bacterial heterogeneity and conjugation is subpopulation specific
V Cyriaque, R Ibarra-Chávez, A Kuchina, G Seelig, J Nesme, J Madsen
2023
Combinatorial photo-controlled spatial sequencing and labeling
G Seelig, A Kuchina, AB Rosenberg
US Patent App. 17/864,690, 2023
2023
How can systems approaches help us understand and treat infectious disease?
A Kuchina, J Yang, B Aldridge, KA Janes, N Subramanian, NJ Krogan, ...
Cell Systems 13 (12), 945-949, 2022
2022
Combinatorial photo-controlled spatial sequencing and labeling
G Seelig, A Kuchina, AB Rosenberg
US Patent 11,421,221, 2022
2022
Method for preparation and high-throughput microbial single-cell rna sequencing of bacteria
G Seelig, A Kuchina, L Brettner, W DePaolo
US Patent App. 16/949,949, 2022
2022
Reversible and Noisy Progression towards a Commitment Point Enables Adaptable and Reliable
A Kuchina, L Espinar, J Garcia-Ojalvo, GM Süel
2011
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Articles 1–20