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Olga Dudko
Olga Dudko
Verified email at physics.ucsd.edu - Homepage
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Cited by
Cited by
Year
Intrinsic rates and activation free energies from single-molecule pulling experiments
OK Dudko, G Hummer, A Szabo
Physical review letters 96 (10), 108101, 2006
9482006
Theory, analysis, and interpretation of single-molecule force spectroscopy experiments
OK Dudko, G Hummer, A Szabo
Proceedings of the National Academy of Sciences 105 (41), 15755-15760, 2008
7432008
Global analysis of X-chromosome dosage compensation
V Gupta, M Parisi, D Sturgill, R Nuttall, M Doctolero, OK Dudko, JD Malley, ...
Journal of biology 5, 1-22, 2006
3342006
Beyond the conventional description of dynamic force spectroscopy of adhesion bonds
OK Dudko, AE Filippov, J Klafter, M Urbakh
Proceedings of the National Academy of Sciences 100 (20), 11378-11381, 2003
3062003
Extracting kinetics from single-molecule force spectroscopy: nanopore unzipping of DNA hairpins
OK Dudko, J Mathé, A Szabo, A Meller, G Hummer
Biophysical journal 92 (12), 4188-4195, 2007
2302007
3D trajectories adopted by coding and regulatory DNA elements: first-passage times for genomic interactions
JS Lucas, Y Zhang, OK Dudko, C Murre
Cell 158 (2), 339-352, 2014
2252014
Pulling direction as a reaction coordinate for the mechanical unfolding of single molecules
RB Best, E Paci, G Hummer, OK Dudko
The Journal of Physical Chemistry B 112 (19), 5968-5976, 2008
1602008
Single-molecule rupture dynamics on multidimensional landscapes
Y Suzuki, OK Dudko
Physical review letters 104 (4), 048101, 2010
1492010
Dynamic force spectroscopy: a Fokker–Planck approach
OK Dudko, AE Filippov, J Klafter, M Urbakh
Chemical Physics Letters 352 (5-6), 499-504, 2002
1142002
Chromosome dynamics near the sol-gel phase transition dictate the timing of remote genomic interactions
N Khanna, Y Zhang, JS Lucas, OK Dudko, C Murre
Nature communications 10 (1), 2771, 2019
1002019
Locating the barrier for folding of single molecules under an external force
OK Dudko, TGW Graham, RB Best
Physical review letters 107 (20), 208301, 2011
942011
Time-dependent diffusion coefficients in periodic porous materials
OK Dudko, AM Berezhkovskii, GH Weiss
The Journal of Physical Chemistry B 109 (45), 21296-21299, 2005
732005
A transformation for the mechanical fingerprints of complex biomolecular interactions
Y Zhang, OK Dudko
Biophysical Journal 106 (2), 237a, 2014
592014
Diffusion in the presence of periodically spaced permeable membranes
OK Dudko, AM Berezhkovskii, GH Weiss
The Journal of chemical physics 121 (22), 11283-11288, 2004
592004
First-passage processes in the genome
Y Zhang, OK Dudko
Annual review of biophysics 45, 117-134, 2016
532016
Distinguishing signatures of multipathway conformational transitions
CA Pierse, OK Dudko
Physical review letters 118 (8), 088101, 2017
522017
Decoding the mechanical fingerprints of biomolecules
OK Dudko
Quarterly reviews of biophysics 49, e3, 2016
522016
Biomolecules under mechanical stress: a simple mechanism of complex behavior
Y Suzuki, OK Dudko
The Journal of chemical physics 134 (6), 2011
512011
Single-molecule mechanics: New insights from the escape-over-a-barrier problem
OK Dudko
Proceedings of the National Academy of Sciences 106 (22), 8795-8796, 2009
442009
Kinetics and energetics of biomolecular folding and binding
CA Pierse, OK Dudko
Biophysical journal 105 (9), L19-L22, 2013
412013
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