Salvatore Milite
Salvatore Milite
Human Technopole
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Cited by
Immune selection determines tumor antigenicity and influences response to checkpoint inhibitors
L Zapata, G Caravagna, MJ Williams, E Lakatos, K AbdulJabbar, ...
Nature Genetics 55 (3), 451-460, 2023
Computational validation of clonal and subclonal copy number alterations from bulk tumor sequencing using CNAqc
A Antonello, R Bergamin, N Calonaci, J Househam, S Milite, MJ Williams, ...
Genome Biology 25 (1), 38, 2024
Transcriptional characterization of stage I epithelial ovarian cancer: a multicentric study
E Calura, M Ciciani, A Sambugaro, L Paracchini, G Benvenuto, S Milite, ...
Cells 8 (12), 1554, 2019
Clonal KEAP1 mutations with loss of heterozygosity share reduced immunotherapy efficacy and low immune cell infiltration in lung adenocarcinoma
S Scalera, B Ricciuti, M Mazzotta, N Calonaci, JV Alessi, L Cipriani, G Bon, ...
Annals of Oncology 34 (3), 275-288, 2023
A Bayesian method to cluster single-cell RNA sequencing data using copy number alterations
S Milite, R Bergamin, L Patruno, N Calonaci, G Caravagna
Bioinformatics 38 (9), 2512-2518, 2022
Homopolymer switches mediate adaptive mutability in mismatch repair-deficient colorectal cancer
H Kayhanian, W Cross, SEM van der Horst, P Barmpoutis, E Lakatos, ...
Nature Genetics, 1-14, 2024
Clinical application of tumour-in-normal contamination assessment from whole genome sequencing
J Mitchell, S Milite, J Bartram, S Walker, N Volkova, O Yavorska, ...
Nature Communications 15 (1), 323, 2024
A Bayesian method to infer copy number clones from single-cell RNA and ATAC sequencing
L Patruno, S Milite, R Bergamin, N Calonaci, A D’Onofrio, F Anselmi, ...
PLOS Computational Biology 19 (11), e1011557, 2023
Epigenetic heritability of cell plasticity drives cancer drug resistance through one-to-many genotype to phenotype mapping
J Fernandez-Mateos, S Milite, E Oliveira, G Vlachogiannis, B Chen, ...
bioRxiv, 2023.11. 15.567140, 2023
Deep Archetypal Analysis for interpretable multi-omic data integration based on biological principles
S Milite, G Caravagna, A Sottoriva
bioRxiv, 2024.04. 05.588238, 2024
Mutation frequency and copy number alterations determine prognosis and metastatic tropism in 60,000 clinical cancer samples
N Calonaci, E Krasniqi, S Scalera, G Gandolfi, S Milite, B Ricciuti, ...
medRxiv, 2024.05. 13.24307238, 2024
Time of Origin and Environmental Drivers of Leukemia Immune Escape after Transplantation
C Toffalori, R Bergamin, A Antonello, AF Tortorelli, G Orofino, M Cristante, ...
Blood 142, 362, 2023
NeuroVelo: interpretable learning of cellular dynamics from single-cell transcriptomic data
I Kouadri Boudjelthia, S Milite, N El Kazwini, J Fernandez-Mateos, ...
bioRxiv, 2023.11. 17.567500, 2023
Clonal Evolution of Chronic Lymphocytic Leukemia with Bimodal CD49d Expression Reveals CD49d Plasticity
E Tissino, N Calonaci, F Pozzo, G Forestieri, L Terzi Di Bergamo, F Vit, ...
Blood 140 (Supplement 1), 9844-9846, 2022
A study of evolutionary dynamics induced by carboplatin, olaparib and paclitaxel in high-grade serous ovarian cancer cell line models
AHIR Garces, S Milite, J Fernandez-Mateos, B Chen, L Pickard, A Stewart, ...
Cancer Research 82 (12_Supplement), 3790-3790, 2022
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