Theodore Pak
Theodore Pak
Massachusetts General Hospital
Verified email at - Homepage
Cited by
Cited by
Interpreting cancer genomes using systematic host network perturbations by tumour virus proteins
O Rozenblatt-Rosen, RC Deo, M Padi, G Adelmant, MA Calderwood, ...
Nature 487 (7408), 491-495, 2012
Sequence-based estimation of minisatellite and microsatellite repeat variability
M Legendre, N Pochet, T Pak, KJ Verstrepen
Genome research 17 (12), 1787-1796, 2007
Morphine via nitric oxide modulates β-amyloid metabolism: a novel protective mechanism for Alzheimer’s disease
T PakABCDEF, P CadetADEF, KJ MantioneAB, GB StefanoEG
Med Sci Monit 11 (10), 366, 2005
How next-generation sequencing and multiscale data analysis will transform infectious disease management
TR Pak, A Kasarskis
Clinical Infectious Diseases 61 (11), 1695-1702, 2015
Comprehensive innate immune profiling of chikungunya virus infection in pediatric cases
D Michlmayr, TR Pak, AH Rahman, EAD Amir, EY Kim, S Kim‐Schulze, ...
Molecular systems biology 14 (8), e7862, 2018
Genome Plasticity of agr-Defective Staphylococcus aureus during Clinical Infection
DR Altman, MJ Sullivan, KI Chacko, D Balasubramanian, TR Pak, ...
Infection and immunity 86 (10), e00331-18, 2018
Epigenomic characterization of Clostridioides difficile finds a conserved DNA methyltransferase that mediates sporulation and pathogenesis
PH Oliveira, JW Ribis, EM Garrett, D Trzilova, A Kim, O Sekulovic, ...
Nature microbiology 5 (1), 166-180, 2020
High-dimensional CyTOF analysis of dengue virus–infected human DCs reveals distinct viral signatures
RE Hamlin, A Rahman, TR Pak, K Maringer, I Mena, D Bernal-Rubio, ...
JCI insight 2 (13), 2017
Whole-genome sequencing identifies emergence of a quinolone resistance mutation in a case of Stenotrophomonas maltophilia bacteremia
TR Pak, DR Altman, O Attie, R Sebra, CL Hamula, M Lewis, G Deikus, ...
Antimicrobial agents and chemotherapy 59 (11), 7117-7120, 2015
ChromoZoom: a flexible, fluid, web-based genome browser
TR Pak, FP Roth
Bioinformatics 29 (3), 384-386, 2013
Genomic confirmation of vancomycin-resistant Enterococcus transmission from deceased donor to liver transplant recipient
A Bashir, O Attie, M Sullivan, R Sebra, KV Singh, D Altman, T Pak, J Dutta, ...
PloS one 12 (3), e0170449, 2017
Genetic basis of emerging vancomycin, linezolid, and daptomycin heteroresistance in a case of persistent Enterococcus faecium bacteremia
KI Chacko, MJ Sullivan, C Beckford, DR Altman, B Ciferri, TR Pak, ...
Antimicrobial agents and chemotherapy 62 (4), e02007-17, 2018
Why clinical trials are terminated
TR Pak, MD Rodriguez, FP Roth
bioRxiv, 021543, 2015
A complete genome screening program of clinical methicillin-resistant Staphylococcus aureus isolates identifies the origin and progression of a neonatal intensive care unit …
MJ Sullivan, DR Altman, KI Chacko, B Ciferri, E Webster, TR Pak, ...
Journal of clinical microbiology 57 (12), e01261-19, 2019
Estimating Local Costs Associated With Clostridium difficile Infection Using Machine Learning and Electronic Medical Records
TR Pak, KI Chacko, T O’Donnell, SS Huprikar, H van Bakel, A Kasarskis, ...
infection control & hospital epidemiology 38 (12), 1478-1486, 2017
Real time investigation of a large nosocomial influenza a outbreak informed by genomic epidemiology
W Javaid, J Ehni, AS Gonzalez-Reiche, JM Carreņo, E Hirsch, J Tan, ...
medRxiv, 2020
PathoSPOT genomic epidemiology reveals under-the-radar nosocomial outbreaks
A Berbel Caban, TR Pak, A Obla, AC Dupper, KI Chacko, L Fox, A Mills, ...
Genome medicine 12 (1), 1-11, 2020
Longitudinal whole-genome analysis identifies variants associated with vancomycin and linezolid resistance changes in Enterococcus faecium in response to treatment
K Chacko, T Pak, R Sebra, A Kasarskis, C Hamula, HV Bakel
Open Forum Infectious Diseases 3 (suppl_1), 2016
A user-editable web-based platform to streamline clinical information flow
M Finkelstein, A Siddiqui, T Pak, K Hu, C Ciccariello, V Knabben, ...
Digital Healthcare Empowering Europeans, 909-913, 2015
Tuning Molecule− Surface Interactions with Sub-Nanometer-Thick Covalently Bound Organic Monolayers
N Camillone, TR Pak, K Adib, RM Osgood
The Journal of Physical Chemistry B 110 (23), 11334-11343, 2006
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