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Taisung Lee
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Cited by
Year
Amber 10
DA Case, TA Darden, TE Cheatham, CL Simmerling, J Wang, RE Duke, ...
University of California, 2008
9657*2008
Amber 2021
DA Case, HM Aktulga, K Belfon, I Ben-Shalom, SR Brozell, DS Cerutti, ...
University of California, San Francisco, 2021
54582021
Calculating structures and free energies of complex molecules: combining molecular mechanics and continuum models
PA Kollman, I Massova, C Reyes, B Kuhn, S Huo, L Chong, M Lee, T Lee, ...
Accounts of chemical research 33 (12), 889-897, 2000
50452000
A point‐charge force field for molecular mechanics simulations of proteins based on condensed‐phase quantum mechanical calculations
Y Duan, C Wu, S Chowdhury, MC Lee, G Xiong, W Zhang, R Yang, ...
Journal of computational chemistry 24 (16), 1999-2012, 2003
49482003
Custom Search 2
DM York, TS Lee, GM Giambasu, A Moser, K Nam, C Silva-Lopez, ...
ACS Symposium Series 712, 275-287, 1998
1159*1998
A density-matrix divide-and-conquer approach for electronic structure calculations of large molecules
W Yang, TS Lee
Journal of Chemical Physics 103 (13), 5674-5678, 1995
6451995
A pseudobond approach to combining quantum mechanical and molecular mechanical methods
Y Zhang, TS Lee, W Yang
The Journal of chemical physics 110 (1), 46-54, 1999
6031999
GPU-accelerated molecular dynamics and free energy methods in Amber18: performance enhancements and new features
TS Lee, DS Cerutti, D Mermelstein, C Lin, S LeGrand, TJ Giese, ...
Journal of chemical information and modeling 58 (10), 2043-2050, 2018
3552018
A fast and high-quality charge model for the next generation general AMBER force field
X He, VH Man, W Yang, TS Lee, J Wang
The Journal of Chemical Physics 153 (11), 2020
2852020
AMBER 2018, University of California, San Francisco, 2018
DA Case, JT Berryman, RM Betz, DS Cerutti, TE Cheatham III, TA Darden, ...
There is no corresponding record for this reference, 2015
2502015
The FF14SB force field
DA Case, V Babin, JT Berryman, RM Betz, Q Cai, DS Cerutti, ...
Amber 14, 29-31, 2014
2502014
AMBER 14; University of California: San Francisco, 2014
DA Case, V Babin, JT Berryman, RM Betz, Q Cai, DS Cerutti, ...
There is no corresponding record for this reference, 1-826, 2014
2462014
Alchemical binding free energy calculations in AMBER20: Advances and best practices for drug discovery
TS Lee, BK Allen, TJ Giese, Z Guo, P Li, C Lin, TD McGee Jr, ...
Journal of Chemical Information and Modeling 60 (11), 5595-5623, 2020
2292020
Linear‐scaling semiempirical quantum calculations for macromolecules
TS Lee, DM York, W Yang
The Journal of Chemical Physics 105 (7), 2744-2750, 1996
2211996
AmberTools
DA Case, HM Aktulga, K Belfon, DS Cerutti, GA Cisneros, VWD Cruzeiro, ...
Journal of chemical information and modeling 63 (20), 6183-6191, 2023
2142023
Using AMBER18 for relative free energy calculations
LF Song, TS Lee, C Zhu, DM York, KM Merz Jr
Journal of chemical information and modeling 59 (7), 3128-3135, 2019
1662019
Solvent structure and hammerhead ribozyme catalysis
M Martick, TS Lee, DM York, WG Scott
Chemistry & biology 15 (4), 332-342, 2008
1442008
AmberTools 16
DA Case, RM Betz, W Botello-Smith, DS Cerutti, TE Cheatham III, ...
University of California, San Francisco, 2016
1222016
AMBER 2018; 2018
DA Case, IY Ben-Shalom, SR Brozell, DS Cerutti, TE Cheatham III, ...
University of California, San Francisco, 2018
1162018
Toward fast and accurate binding affinity prediction with pmemdGTI: An efficient implementation of GPU-accelerated thermodynamic integration
TS Lee, Y Hu, B Sherborne, Z Guo, DM York
Journal of chemical theory and computation 13 (7), 3077-3084, 2017
1152017
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Articles 1–20