Samuel Alizon

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Mircea T. SOFONEAProfessor (Associate) - PCCEI (Univ. Montpellier, Inserm, EFS) & Nîmes Univ. HospitalVerified email at normalesup.org
Christian SelingerSwiss Tropical and Public Health InstituteVerified email at swisstph.ch
Carmen Lia MurallMcGill UniversityVerified email at mcgill.ca
Baptiste ElieMIVEGEC, CNRS IRD UMVerified email at ird.fr
Nicole MideoUniversity of TorontoVerified email at utoronto.ca
Bastien ReynéMIVEGEC (Univ. Montpellier, IRD, CNRS)Verified email at ird.fr
Ramsès DJIDJOU DEMASSEResearch Scientist, IRDVerified email at ird.fr
ignacio g. bravoCentre National de la Recherche Scientifique (CNRS); MIVEGEC, Montpellier, FranceVerified email at cnrs.fr
Marc ChoisyUniversity of OxfordVerified email at oucru.org
Sebastian BonhoefferTheoretical Biology, ETH ZurichVerified email at env.ethz.ch
Matthew HartfieldNERC Independent Research Fellow, The University of EdinburghVerified email at ed.ac.uk
Gonché DaneshMIVEGEC, CNRS, IRD, UMVerified email at ird.fr
Christophe FraserPandemic Sciences Institute, Nuffield Department of Medicine, University of OxfordVerified email at bdi.ox.ac.uk
Troy DayDepartment of Mathematics and Statistics, Queen's UniversityVerified email at queensu.ca
Jacobus (Jaap) de RoodeProfessor of Biology, Emory UniversityVerified email at emory.edu
Amy HurfordBiology Department, Memorial University of NewfoundlandVerified email at mun.ca
Fabio LucianiAssociate Professor, University of New South Wales, Sydney, AustraliaVerified email at unsw.edu.au
Roger D. KouyosUniversity of Zurich; University Hospital ZurichVerified email at uzh.ch
Mathieu Moslonka-LefebvreINRA, UR MaIAGE; University of Cambridge, Dpt of Plant Sciences; AgroParisTechVerified email at moslonkalefebvre.com
Roland RegoesETH ZurichVerified email at env.ethz.ch

Samuel Alizon

Directeur de Recherche, CNRS, CIRB, Paris

Verified email at ird.fr - Homepage

Evolution Virulence Multiple Infections Theoretical Biology Evolutionary Epidemiology


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Virulence evolution and the trade‐off hypothesis: history, current state of affairs and the future S Alizon, A Hurford, N Mideo, M Van Baalen Journal of evolutionary biology 22 (2), 245-259, 2009	902	2009
Inclusive fitness theory and eusociality P Abbot, J Abe, J Alcock, S Alizon, JAC Alpedrinha, M Andersson, ... Nature 471 (7339), E1-E4, 2011	534	2011
Multiple infections and the evolution of virulence S Alizon, JC De Roode, Y Michalakis Ecology letters 16 (4), 556-567, 2013	413	2013
Linking within-and between-host dynamics in the evolutionary epidemiology of infectious diseases N Mideo, S Alizon, T Day Trends in ecology & evolution 23 (9), 511-517, 2008	353	2008
Virulence and pathogenesis of HIV-1 infection: an evolutionary perspective C Fraser, K Lythgoe, GE Leventhal, G Shirreff, TD Hollingsworth, S Alizon, ... Science 343 (6177), 1243727, 2014	277	2014
What is a pathogen? Toward a process view of host-parasite interactions PO Méthot, S Alizon Virulence 5 (8), 775-785, 2014	168	2014
Multiple infections, immune dynamics, and the evolution of virulence S Alizon, M van Baalen The American Naturalist 172 (4), E150-E168, 2008	163	2008
The virulence–transmission trade-off in vector-borne plant viruses: a review of (non-) existing studies R Froissart, J Doumayrou, F Vuillaume, S Alizon, Y Michalakis Philosophical Transactions of the Royal Society B: Biological Sciences 365 …, 2010	159	2010
Emergence of a convex trade-off between transmission and virulence S Alizon, M van Baalen The American Naturalist 165 (6), E155-E167, 2005	148	2005
Phylogenetic approach reveals that virus genotype largely determines HIV set-point viral load S Alizon, V Von Wyl, T Stadler, RD Kouyos, S Yerly, B Hirschel, J Böni, ... PLoS pathogens 6 (9), e1001123, 2010	142	2010
Within-host and between-host evolutionary rates across the HIV-1 genome S Alizon, C Fraser Retrovirology 10, 1-10, 2013	138	2013
Empty sites can promote altruistic behavior S Alizon, P Taylor Evolution 62 (6), 1335-1344, 2008	130	2008
Adaptive virulence evolution: the good old fitness-based approach S Alizon, Y Michalakis Trends in ecology & evolution 30 (5), 248-254, 2015	122	2015
Rapid spread of the SARS-CoV-2 Delta variant in some French regions, June 2021 S Alizon, S Haim-Boukobza, V Foulongne, L Verdurme, ... Eurosurveillance 26 (28), 2100573, 2021	119	2021
Optimal COVID-19 epidemic control until vaccine deployment R Djidjou-Demasse, Y Michalakis, M Choisy, MT Sofonea, S Alizon MedRxiv, 2020.04. 02.20049189, 2020	114	2020
Epidemiological and clinical consequences of within-host evolution S Alizon, F Luciani, RR Regoes Trends in microbiology 19 (1), 24-32, 2011	112	2011
Modelling the course of an HIV infection: insights from ecology and evolution S Alizon, C Magnus Viruses 4 (10), 1984-2013, 2012	97	2012
Co-infection and super-infection models in evolutionary epidemiology S Alizon Interface focus 3 (6), 20130031, 2013	95	2013
Introducing the outbreak threshold in epidemiology M Hartfield, S Alizon PLoS pathogens 9 (6), e1003277, 2013	90	2013
Transmission-recovery trade-offs to study parasite evolution S Alizon The American Naturalist 172 (3), E113-E121, 2008	76	2008

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