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Yang Jiang
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Force field benchmark of amino acids: I. hydration and diffusion in different water models
H Zhang, C Yin, Y Jiang, D van der Spoel
Journal of chemical information and modeling 58 (5), 1037-1052, 2018
822018
Force field benchmark of amino acids. 2. Partition coefficients between water and organic solvents
H Zhang, Y Jiang, Z Cui, C Yin
Journal of Chemical Information and Modeling 58 (8), 1669-1681, 2018
432018
Free-energy calculations of ionic hydration consistent with the experimental hydration free energy of the proton
H Zhang, Y Jiang, H Yan, C Yin, T Tan, D van der Spoel
The Journal of Physical Chemistry Letters 8 (12), 2705-2712, 2017
432017
Rational design of methodology-independent metal parameters using a nonbonded dummy model
Y Jiang, H Zhang, T Tan
Journal of Chemical Theory and Computation 12 (7), 3250-3260, 2016
422016
How synonymous mutations alter enzyme structure and function over long timescales
Y Jiang, SS Neti, I Sitarik, P Pradhan, P To, Y Xia, SD Fried, SJ Booker, ...
Nature Chemistry 15 (3), 308-318, 2023
412023
Biophysical and molecular docking approaches for the investigation of biomolecular interactions between amphotericin B and bovine serum albumin
M Raza, A Ahmad, F Yue, Z Khan, Y Jiang, Y Wei, S Raza, WW He, ...
Journal of Photochemistry and Photobiology B: Biology 170, 6-15, 2017
372017
Electrostatic interactions govern extreme nascent protein ejection times from ribosomes and can delay ribosome recycling
DA Nissley, QV Vu, F Trovato, N Ahmed, Y Jiang, MS Li, EP O’Brien
Journal of the American Chemical Society 142 (13), 6103-6110, 2020
352020
Refined Dummy Atom Model of Mg2+ by Simple Parameter Screening Strategy with Revised Experimental Solvation Free Energy
Y Jiang, H Zhang, W Feng, T Tan
Journal of Chemical Information and Modeling 55 (12), 2575-2586, 2015
302015
Universal protein misfolding intermediates can bypass the proteostasis network and remain soluble and less functional
DA Nissley, Y Jiang, F Trovato, I Sitarik, KB Narayan, P To, Y Xia, ...
Nature communications 13 (1), 3081, 2022
252022
Comparative assessment of computational methods for free energy calculations of ionic hydration
H Zhang, Y Jiang, H Yan, Z Cui, C Yin
Journal of Chemical Information and Modeling 57 (11), 2763-2775, 2017
232017
Molecular mechanism of tobramycin with human serum albumin for probing binding interactions: multi-spectroscopic and computational approaches
M Raza, Y Wei, Y Jiang, A Ahmad, S Raza, S Ullah, Y Han, QU Khan, ...
New Journal of Chemistry 41 (16), 8203-8213, 2017
232017
Lid Closure Mechanism of Yarrowia lipolytica Lipase in Methanol Investigated by Molecular Dynamics Simulation
Y Jiang, L Li, H Zhang, W Feng, T Tan
Journal of chemical information and modeling 54 (7), 2033-2041, 2014
232014
Ribosome elongation kinetics of consecutively charged residues are coupled to electrostatic force
SE Leininger, J Rodriguez, QV Vu, Y Jiang, MS Li, C Deutsch, EP O’Brien
Biochemistry 60 (43), 3223-3235, 2021
212021
Insights from spectroscopic and in-silico techniques for the exploitation of biomolecular interactions between Human serum albumin and Paromomycin
M Raza, Y Jiang, Y Wei, A Ahmad, A Khan, Y Qipeng
Colloids and Surfaces B: Biointerfaces 157, 242-253, 2017
202017
Theoretical and Experimental Studies on Activity of Yarrowia lipolytica Lipase in Methanol/Water Mixtures
L Li, Y Jiang, H Zhang, W Feng, B Chen, T Tan
The Journal of Physical Chemistry B 118 (8), 1976-1983, 2014
192014
Rational design of nonbonded point charge models for divalent metal cations with Lennard-Jones 12-6 potential
Y Zhang, Y Jiang, J Peng, H Zhang
Journal of Chemical Information and Modeling 61 (8), 4031-4044, 2021
182021
Enhancement of methanol resistance of Yarrowia lipolytica lipase 2 using β-cyclodextrin as an additive: Insights from experiments and molecular dynamics simulation
H Cao, Y Jiang, H Zhang, K Nie, M Lei, L Deng, F Wang, T Tan
Enzyme and microbial technology 96, 157-162, 2017
162017
A water-dependent kinetics guide for complex lipase-mediated synthesis of biolubricants in a water activity control reactor
Y Tao, G Chen, IV Pavlidis, Y Jiang, L Qie, C Cui, L Liu, B Chen, T Tan
Catalysis Science & Technology 5 (12), 5120-5128, 2015
152015
Modeling Coordination-Directed Self-Assembly of M2L4 Nanocapsule Featuring Competitive Guest Encapsulation
Y Jiang, H Zhang, Z Cui, T Tan
The Journal of Physical Chemistry Letters 8 (9), 2082-2086, 2017
132017
Biophysical investigation of interactions between sorbic acid and human serum albumin through spectroscopic and computational approaches
M Raza, Y Jiang, B Ahmad, A ur Rahman, S Raza, A Khan, K Tahir, ...
New Journal of Chemistry 45 (17), 7682-7693, 2021
102021
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